WO2012031035A3 - Method and systems for processing polymeric sequence data and related information - Google Patents

Method and systems for processing polymeric sequence data and related information Download PDF

Info

Publication number
WO2012031035A3
WO2012031035A3 PCT/US2011/050079 US2011050079W WO2012031035A3 WO 2012031035 A3 WO2012031035 A3 WO 2012031035A3 US 2011050079 W US2011050079 W US 2011050079W WO 2012031035 A3 WO2012031035 A3 WO 2012031035A3
Authority
WO
WIPO (PCT)
Prior art keywords
systems
related information
polymeric sequence
sequence data
information
Prior art date
Application number
PCT/US2011/050079
Other languages
French (fr)
Other versions
WO2012031035A2 (en
Inventor
Lawrence Ganeshalingam
Patrick Nikita Allen
Original Assignee
Annai Systems Inc.
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Annai Systems Inc. filed Critical Annai Systems Inc.
Publication of WO2012031035A2 publication Critical patent/WO2012031035A2/en
Publication of WO2012031035A3 publication Critical patent/WO2012031035A3/en

Links

Classifications

    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B50/00—ICT programming tools or database systems specially adapted for bioinformatics
    • G16B50/50—Compression of genetic data
    • G—PHYSICS
    • G06—COMPUTING; CALCULATING OR COUNTING
    • G06F—ELECTRIC DIGITAL DATA PROCESSING
    • G06F16/00—Information retrieval; Database structures therefor; File system structures therefor
    • G06F16/20—Information retrieval; Database structures therefor; File system structures therefor of structured data, e.g. relational data
    • G06F16/22—Indexing; Data structures therefor; Storage structures
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G16B30/10—Sequence alignment; Homology search
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B50/00—ICT programming tools or database systems specially adapted for bioinformatics

Abstract

Methods and systems for organizing, representing and processing polymeric sequence information, including biopolymeric sequence information such as DNA sequence information and related information are disclosed herein. Polymeric sequence and associated information may be represented using a plurality of data units, each of which includes one or more headers and a payload containing a representation of a segment of the polymeric sequence. Each header may include or be linked to a portion of the associated information.
PCT/US2011/050079 2010-08-31 2011-08-31 Method and systems for processing polymeric sequence data and related information WO2012031035A2 (en)

Applications Claiming Priority (6)

Application Number Priority Date Filing Date Title
US37879910P 2010-08-31 2010-08-31
US61/378,799 2010-08-31
US40605510P 2010-10-22 2010-10-22
US61/406,055 2010-10-22
US41145510P 2010-11-08 2010-11-08
US61/411,455 2010-11-08

Publications (2)

Publication Number Publication Date
WO2012031035A2 WO2012031035A2 (en) 2012-03-08
WO2012031035A3 true WO2012031035A3 (en) 2012-05-31

Family

ID=45773509

Family Applications (6)

Application Number Title Priority Date Filing Date
PCT/US2011/050075 WO2012031031A2 (en) 2010-08-31 2011-08-31 Method and systems for processing polymeric sequence data and related information
PCT/US2011/050073 WO2012031029A2 (en) 2010-08-31 2011-08-31 Method and systems for processing polymeric sequence data and related information
PCT/US2011/050080 WO2012031036A2 (en) 2010-08-31 2011-08-31 Method and systems for processing polymeric sequence data and related information
PCT/US2011/050078 WO2012031034A2 (en) 2010-08-31 2011-08-31 Method and systems for processing polymeric sequence data and related information
PCT/US2011/050077 WO2012031033A2 (en) 2010-08-31 2011-08-31 Method and systems for processing polymeric sequence data and related information
PCT/US2011/050079 WO2012031035A2 (en) 2010-08-31 2011-08-31 Method and systems for processing polymeric sequence data and related information

Family Applications Before (5)

Application Number Title Priority Date Filing Date
PCT/US2011/050075 WO2012031031A2 (en) 2010-08-31 2011-08-31 Method and systems for processing polymeric sequence data and related information
PCT/US2011/050073 WO2012031029A2 (en) 2010-08-31 2011-08-31 Method and systems for processing polymeric sequence data and related information
PCT/US2011/050080 WO2012031036A2 (en) 2010-08-31 2011-08-31 Method and systems for processing polymeric sequence data and related information
PCT/US2011/050078 WO2012031034A2 (en) 2010-08-31 2011-08-31 Method and systems for processing polymeric sequence data and related information
PCT/US2011/050077 WO2012031033A2 (en) 2010-08-31 2011-08-31 Method and systems for processing polymeric sequence data and related information

Country Status (3)

Country Link
US (7) US20120089607A1 (en)
EP (1) EP2612271A4 (en)
WO (6) WO2012031031A2 (en)

Families Citing this family (49)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US9646134B2 (en) 2010-05-25 2017-05-09 The Regents Of The University Of California Bambam: parallel comparative analysis of high-throughput sequencing data
EP2577538A1 (en) * 2010-05-25 2013-04-10 The Regents of the University of California Bambam: parallel comparative analysis of high-throughput sequencing data
US20120089607A1 (en) 2010-08-31 2012-04-12 Annai Systems, Inc. Method and systems for processing polymeric sequence data and related information
WO2012122553A2 (en) 2011-03-09 2012-09-13 Lawrence Ganeshalingam Biological data networks and methods therefor
EP2595076B1 (en) * 2011-11-18 2019-05-15 Tata Consultancy Services Limited Compression of genomic data
KR101922129B1 (en) * 2011-12-05 2018-11-26 삼성전자주식회사 Method and apparatus for compressing and decompressing genetic information using next generation sequencing(NGS)
EP2608096B1 (en) * 2011-12-24 2020-08-05 Tata Consultancy Services Ltd. Compression of genomic data file
EP2864896A4 (en) 2012-06-22 2016-07-20 Dan Maltbie System and method for secure, high-speed transfer of very large files
US9111095B2 (en) 2012-08-29 2015-08-18 The Johns Hopkins University Apparatus and method for identifying similarity via dynamic decimation of token sequence n-grams
US9003529B2 (en) 2012-08-29 2015-04-07 The Johns Hopkins University Apparatus and method for identifying related code variants in binaries
US8937564B2 (en) * 2013-01-10 2015-01-20 Infinidat Ltd. System, method and non-transitory computer readable medium for compressing genetic information
US9483610B2 (en) 2013-01-17 2016-11-01 Edico Genome, Corp. Bioinformatics systems, apparatuses, and methods executed on an integrated circuit processing platform
US10691775B2 (en) 2013-01-17 2020-06-23 Edico Genome, Corp. Bioinformatics systems, apparatuses, and methods executed on an integrated circuit processing platform
US9679104B2 (en) 2013-01-17 2017-06-13 Edico Genome, Corp. Bioinformatics systems, apparatuses, and methods executed on an integrated circuit processing platform
US10847251B2 (en) 2013-01-17 2020-11-24 Illumina, Inc. Genomic infrastructure for on-site or cloud-based DNA and RNA processing and analysis
US9792405B2 (en) 2013-01-17 2017-10-17 Edico Genome, Corp. Bioinformatics systems, apparatuses, and methods executed on an integrated circuit processing platform
US10068054B2 (en) 2013-01-17 2018-09-04 Edico Genome, Corp. Bioinformatics systems, apparatuses, and methods executed on an integrated circuit processing platform
KR20160011670A (en) 2013-05-28 2016-02-01 라모트 앳 텔-아비브 유니버시티 리미티드 Detection of hydroxymethylcytosine bases
AU2014348566B2 (en) * 2013-11-13 2019-02-28 Five3 Genomics, Llc Systems and methods for transmission and pre-processing of sequencing data
US9824068B2 (en) 2013-12-16 2017-11-21 10X Genomics, Inc. Methods and apparatus for sorting data
US10354746B2 (en) * 2014-01-27 2019-07-16 Georgia Tech Research Corporation Methods and systems for identifying CRISPR/Cas off-target sites
US11315659B2 (en) * 2014-01-27 2022-04-26 Georgia Tech Research Corporation Methods and systems for identifying nucleotide-guided nuclease off-target sites
TW201535984A (en) 2014-01-29 2015-09-16 Relican Analytics Inc Optimized data condenser and method
US9697327B2 (en) 2014-02-24 2017-07-04 Edico Genome Corporation Dynamic genome reference generation for improved NGS accuracy and reproducibility
US9805099B2 (en) * 2014-10-30 2017-10-31 The Johns Hopkins University Apparatus and method for efficient identification of code similarity
US9857328B2 (en) 2014-12-18 2018-01-02 Agilome, Inc. Chemically-sensitive field effect transistors, systems and methods for manufacturing and using the same
US10006910B2 (en) 2014-12-18 2018-06-26 Agilome, Inc. Chemically-sensitive field effect transistors, systems, and methods for manufacturing and using the same
US9859394B2 (en) 2014-12-18 2018-01-02 Agilome, Inc. Graphene FET devices, systems, and methods of using the same for sequencing nucleic acids
US9618474B2 (en) 2014-12-18 2017-04-11 Edico Genome, Inc. Graphene FET devices, systems, and methods of using the same for sequencing nucleic acids
WO2016100049A1 (en) 2014-12-18 2016-06-23 Edico Genome Corporation Chemically-sensitive field effect transistor
US10020300B2 (en) 2014-12-18 2018-07-10 Agilome, Inc. Graphene FET devices, systems, and methods of using the same for sequencing nucleic acids
EP3329491A2 (en) 2015-03-23 2018-06-06 Edico Genome Corporation Method and system for genomic visualization
US10395759B2 (en) 2015-05-18 2019-08-27 Regeneron Pharmaceuticals, Inc. Methods and systems for copy number variant detection
US10394763B2 (en) * 2015-05-19 2019-08-27 Samsung Electronics Co., Ltd. Method and device for generating pileup file from compressed genomic data
WO2017106259A1 (en) * 2015-12-17 2017-06-22 Albert Einstein College Of Medicine, Inc. Nuclear receptor set domain containing protein 2 transition state and uses thereof
US20170270245A1 (en) 2016-01-11 2017-09-21 Edico Genome, Corp. Bioinformatics systems, apparatuses, and methods for performing secondary and/or tertiary processing
US10068183B1 (en) 2017-02-23 2018-09-04 Edico Genome, Corp. Bioinformatics systems, apparatuses, and methods executed on a quantum processing platform
CN105787290B (en) * 2016-01-30 2018-12-18 陕西师范大学 Synthetic biology data processing method and its processing system
WO2017201081A1 (en) 2016-05-16 2017-11-23 Agilome, Inc. Graphene fet devices, systems, and methods of using the same for sequencing nucleic acids
EP3526710A1 (en) * 2016-10-11 2019-08-21 Genomsys SA Method and system for storing and accessing bioinformatics data
US10936746B2 (en) * 2016-12-21 2021-03-02 Serotiny, Inc. Method and system for manipulating and communicating genetic constructs independent of their genetic sequence
US10540338B2 (en) * 2017-01-30 2020-01-21 Alfresco Software, Inc. Scalable fine grained access control within a search engine
WO2019005104A1 (en) * 2017-06-30 2019-01-03 Intel Corporation Methods, systems and apparatus to track a provenance of goods
WO2019203815A1 (en) * 2018-04-18 2019-10-24 Hewlett-Packard Development Company, L.P. Storing spectroscopy data in layers
US11886431B2 (en) 2018-05-22 2024-01-30 Hyland Uk Operations Limited Real-time analytical queries of a document store
US11093547B2 (en) 2018-06-19 2021-08-17 Intel Corporation Data storage based on encoded DNA sequences
EP3976823A4 (en) * 2019-05-28 2023-07-12 Quest Diagnostics Investments LLC Systems and methods to identify mutations in mitochondrial genomes
EP4087139A4 (en) * 2019-12-31 2023-01-18 MGI Tech Co., Ltd. Method and device for creating gene mutation dictionary and using the dictionary to compress genome data
CN116052774B (en) * 2022-07-04 2023-11-28 湖南中医药大学 Method and system for identifying key miRNA based on deep learning

Citations (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20020111742A1 (en) * 2000-09-19 2002-08-15 The Regents Of The University Of California Methods for classifying high-dimensional biological data
US20030097227A1 (en) * 2001-03-29 2003-05-22 Bloch Karen Marie Method of non-linear analysis of biological sequence data
US20050053968A1 (en) * 2003-03-31 2005-03-10 Council Of Scientific And Industrial Research Method for storing information in DNA
US20070026406A1 (en) * 2003-08-13 2007-02-01 Iconix Pharmaceuticals, Inc. Apparatus and method for classifying multi-dimensional biological data

Family Cites Families (73)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US4993025A (en) 1989-11-21 1991-02-12 Picker International, Inc. High efficiency image data transfer network
US5668810A (en) 1995-04-26 1997-09-16 Scientific-Atlanta, Inc. Data transmission protocol method and apparatus
US5776767A (en) 1995-12-12 1998-07-07 Visible Genetics Inc. Virtual DNA sequencer
US6119120A (en) * 1996-06-28 2000-09-12 Microsoft Corporation Computer implemented methods for constructing a compressed data structure from a data string and for using the data structure to find data patterns in the data string
CA2321270A1 (en) 1998-03-02 1999-09-10 Senju Pharmaceutical Co., Ltd. Novel calpain and dna encoding the same
CA2339409A1 (en) 1998-08-11 2000-02-24 Darwin Discovery Ltd. Identification of the gene causing the mouse scurfy phenotype and its human ortholog
US6356950B1 (en) 1999-01-11 2002-03-12 Novilit, Inc. Method for encoding and decoding data according to a protocol specification
GB2363874B (en) 1999-11-06 2004-08-04 Dennis Sunga Fernandez Bioinformatic transaction scheme
EP1198596A1 (en) * 2000-02-15 2002-04-24 Lynx Therapeutics, Inc. Data analysis and display system for ligation-based dna sequencing
US7428554B1 (en) 2000-05-23 2008-09-23 Ocimum Biosolutions, Inc. System and method for determining matching patterns within gene expression data
US20020029113A1 (en) 2000-08-22 2002-03-07 Yixin Wang Method and system for predicting splice variant from DNA chip expression data
US20030082544A1 (en) 2001-07-11 2003-05-01 Third Wave Technologies, Inc. Methods and systems for validating detection assays, developing in-vitro diagnostic DNA or RNA analysis products, and increasing revenue and/or profit margins from in-vitro diagnostic DNA or RNA analysis assays
US20020156792A1 (en) 2000-12-06 2002-10-24 Biosentients, Inc. Intelligent object handling device and method for intelligent object data in heterogeneous data environments with high data density and dynamic application needs
US20040005558A1 (en) 2001-01-18 2004-01-08 Anderson David W. Proteins, polynucleotides ecoding them and methods of using the same
US20070190534A1 (en) 2001-06-11 2007-08-16 Genesis Genomics Inc. Mitochondrial sites and genes associated with prostate cancer
US7238778B2 (en) 2001-07-17 2007-07-03 Smithkline Beecham Corporation Crystallized glucocorticoid receptor ligand binding domain polypeptide and screening methods employing same
WO2003009210A1 (en) 2001-07-18 2003-01-30 Gene Logic, Inc. Methods of providing customized gene annotation reports
US20050049795A1 (en) 2001-08-21 2005-03-03 Miki Fikuda Biological sequence information reading method and storing method
US20030039362A1 (en) 2001-08-24 2003-02-27 Andrea Califano Methods for indexing and storing genetic data
US20030055824A1 (en) 2001-09-19 2003-03-20 Andrea Califano Distributed personalized genetic safe
US6920396B1 (en) 2001-09-20 2005-07-19 Phenogenomics Corporation System and method for providing flexible access and retrieval of sequence data from a plurality of biological data repositories
US7983848B2 (en) 2001-10-16 2011-07-19 Cerner Innovation, Inc. Computerized method and system for inferring genetic findings for a patient
US7248582B2 (en) 2002-02-13 2007-07-24 Sun Microsystems, Inc. Method and system for labeling data in a communications system
US20030236393A1 (en) 2002-03-22 2003-12-25 United States Of America Dept Of Vetrans Affairs Virulence genes of M. marinum and M. tuberculosis
US7408957B2 (en) 2002-06-13 2008-08-05 International Business Machines Corporation Selective header field dispatch in a network processing system
US7856317B2 (en) 2002-06-14 2010-12-21 Genomatica, Inc. Systems and methods for constructing genomic-based phenotypic models
US7158892B2 (en) 2002-06-28 2007-01-02 International Business Machines Corporation Genomic messaging system
TW588243B (en) 2002-07-31 2004-05-21 Trek 2000 Int Ltd System and method for authentication
AU2003298733B2 (en) 2002-11-27 2009-06-18 Agena Bioscience, Inc. Fragmentation-based methods and systems for sequence variation detection and discovery
US7366352B2 (en) 2003-03-20 2008-04-29 International Business Machines Corporation Method and apparatus for performing fast closest match in pattern recognition
US7539495B2 (en) 2003-03-24 2009-05-26 Strix Systems, Inc. Node placement method within a wireless network, such as a wireless local area network
JP2004355294A (en) * 2003-05-29 2004-12-16 National Institute Of Advanced Industrial & Technology Designing method of dna code as information carrier
EP1639087A4 (en) 2003-06-25 2008-12-24 Smithkline Beecham Corp Biological data set comparison method
JP4247759B2 (en) 2003-06-27 2009-04-02 日本光電工業株式会社 Subject information transmission system and subject information synchronization method
GB2421732A (en) 2003-08-12 2006-07-05 Cognia Corp An advanced databasing system for chemical molecular and cellular biology
JP4093157B2 (en) 2003-09-17 2008-06-04 株式会社日立製作所 Distributed inspection device and host inspection device
US7359379B2 (en) * 2003-09-30 2008-04-15 Nortel Networks Limited Managing data in a subtended switch
US7467219B2 (en) 2003-11-24 2008-12-16 At&T Intellectual Property I, L.P. Methods for providing communications services
JP4449055B2 (en) 2003-11-27 2010-04-14 日本光電工業株式会社 Biological signal data transmission / reception system and biological signal data transmission / reception method
US20070271604A1 (en) 2004-03-17 2007-11-22 Fidelitygenetic Ltd. Secure Transaction of Dna Data
CA2561948A1 (en) 2004-04-01 2005-10-20 Neomedia Technologies, Inc. System and method of using dna for linking to network resources
US7657383B2 (en) 2004-05-28 2010-02-02 International Business Machines Corporation Method, system, and apparatus for compactly storing a subject genome
WO2006052242A1 (en) 2004-11-08 2006-05-18 Seirad, Inc. Methods and systems for compressing and comparing genomic data
US7354720B2 (en) 2004-12-30 2008-04-08 Affymetrix, Inc. Label free analysis of nucleic acids
ES2311958T3 (en) 2005-02-11 2009-02-16 Smartgene Gmbh PROCEDURE AND COMPUTER SYSTEM TO VALIDATE DNA SEQUENCING DATA.
WO2006102128A2 (en) 2005-03-18 2006-09-28 Bioinformatica Llc System, method and computer program for non-binary sequence comparison
US7739390B2 (en) 2005-03-23 2010-06-15 Cisco Technology, Inc. Method and apparatus for achieving optimal transfer times in a peer-to-peer network
US20060224687A1 (en) 2005-03-31 2006-10-05 Popkin Laird A Method and apparatus for offline cooperative file distribution using cache nodes
US20060285685A1 (en) 2005-06-19 2006-12-21 Temba Msezane DNA Based Identification and Tracking System
US7890752B2 (en) * 2005-10-31 2011-02-15 Scenera Technologies, Llc Methods, systems, and computer program products for associating an originator of a network packet with the network packet using biometric information
US20070148658A1 (en) 2005-12-23 2007-06-28 Nelson Charles F Systems and methods for biopolymeric probe design using graphical representation of a biopolymeric sequence
US20070288172A1 (en) 2006-06-09 2007-12-13 David Benjamin Aronow Biomedical information modeling
WO2008011388A2 (en) 2006-07-15 2008-01-24 Solid State Networks, Inc. Methods and apparatus for transferring data
EP2163987A3 (en) * 2007-04-24 2013-01-23 Oblong Industries, Inc. Processing of events in data processing environments
US20080281818A1 (en) 2007-05-10 2008-11-13 The Research Foundation Of State University Of New York Segmented storage and retrieval of nucleotide sequence information
US7716710B1 (en) 2007-05-14 2010-05-11 Sprint Spectrum L.P. Managed cooperative downloading of digital cinema content
US7885969B2 (en) 2007-09-17 2011-02-08 International Business Machines Corporation System and method for executing compute-intensive database user-defined programs on an attached high-performance parallel computer
US8606846B2 (en) 2007-10-15 2013-12-10 Nbcuniversal Media, Llc Accelerating peer-to-peer content distribution
WO2009094132A2 (en) 2008-01-22 2009-07-30 Sheldon Winnick Medical data collection device
US8448230B2 (en) 2008-08-22 2013-05-21 International Business Machines Corporation System and method for real world biometric analytics through the use of a multimodal biometric analytic wallet
US20100135488A1 (en) 2008-12-01 2010-06-03 Electronics And Telecommunications Research Institute Svc encryption apparatus and method and contents providing system and method
US20100161607A1 (en) 2008-12-22 2010-06-24 Jasjit Singh System and method for analyzing genome data
US20100169313A1 (en) 2008-12-30 2010-07-01 Expanse Networks, Inc. Pangenetic Web Item Feedback System
US20100169338A1 (en) 2008-12-30 2010-07-01 Expanse Networks, Inc. Pangenetic Web Search System
KR101025848B1 (en) 2008-12-30 2011-03-30 삼성전자주식회사 The method and apparatus for integrating and managing personal genome
US8386519B2 (en) 2008-12-30 2013-02-26 Expanse Networks, Inc. Pangenetic web item recommendation system
EP2216958B1 (en) 2009-02-10 2011-10-26 Alcatel Lucent Method and device for reconstructing torrent content metadata
JP5522349B2 (en) 2009-04-14 2014-06-18 任天堂株式会社 INPUT SYSTEM, INFORMATION PROCESSING SYSTEM, PERIPHERAL DEVICE CONTROL METHOD, AND OPERATION DEVICE CONTROL PROGRAM
US8412462B1 (en) 2010-06-25 2013-04-02 Annai Systems, Inc. Methods and systems for processing genomic data
US20120089607A1 (en) 2010-08-31 2012-04-12 Annai Systems, Inc. Method and systems for processing polymeric sequence data and related information
WO2012122553A2 (en) 2011-03-09 2012-09-13 Lawrence Ganeshalingam Biological data networks and methods therefor
US20130246460A1 (en) 2011-03-09 2013-09-19 Annai Systems, Inc. System and method for facilitating network-based transactions involving sequence data
EP2864896A4 (en) 2012-06-22 2016-07-20 Dan Maltbie System and method for secure, high-speed transfer of very large files

Patent Citations (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20020111742A1 (en) * 2000-09-19 2002-08-15 The Regents Of The University Of California Methods for classifying high-dimensional biological data
US20030097227A1 (en) * 2001-03-29 2003-05-22 Bloch Karen Marie Method of non-linear analysis of biological sequence data
US20050053968A1 (en) * 2003-03-31 2005-03-10 Council Of Scientific And Industrial Research Method for storing information in DNA
US20070026406A1 (en) * 2003-08-13 2007-02-01 Iconix Pharmaceuticals, Inc. Apparatus and method for classifying multi-dimensional biological data

Also Published As

Publication number Publication date
US9177099B2 (en) 2015-11-03
US20120089603A1 (en) 2012-04-12
US9189594B2 (en) 2015-11-17
US20120095693A1 (en) 2012-04-19
WO2012031029A3 (en) 2012-08-16
WO2012031034A2 (en) 2012-03-08
WO2012031031A2 (en) 2012-03-08
EP2612271A2 (en) 2013-07-10
WO2012031035A2 (en) 2012-03-08
WO2012031033A3 (en) 2012-06-14
WO2012031029A2 (en) 2012-03-08
US20170199962A1 (en) 2017-07-13
US20120089607A1 (en) 2012-04-12
WO2012031036A2 (en) 2012-03-08
WO2012031031A3 (en) 2012-07-05
US9177101B2 (en) 2015-11-03
US20120089608A1 (en) 2012-04-12
US9177100B2 (en) 2015-11-03
WO2012031036A3 (en) 2012-06-21
US20120089339A1 (en) 2012-04-12
US20120089652A1 (en) 2012-04-12
WO2012031034A3 (en) 2012-05-10
EP2612271A4 (en) 2017-07-19
WO2012031033A2 (en) 2012-03-08

Similar Documents

Publication Publication Date Title
WO2012031036A3 (en) Method and systems for processing polymeric sequence data and related information
EP2293498A4 (en) Node, data processing system and data processing method
WO2017083594A3 (en) Platform for visual synthesis of genomic, microbiome, and metabolome data
WO2012015809A3 (en) Consumable data management
EP2199942A3 (en) Methods and systems for enabling community-tested security features for legacy applications
EP2560102A4 (en) Information retrieval method, information retrieval server, and information retrieval system
EP2365456A3 (en) Data structure, method and system for predicting medical conditions
EP2634983A3 (en) Data transmission apparatus, data transmission system and data transmission method
EP2466777A4 (en) Method, apparatus and system for information bits transmission
WO2010147950A3 (en) Data visualization system and method
WO2009108918A3 (en) Methods and systems for social networking based on nucleic acid sequences
HK1157468A1 (en) An information guidance implementing method, information guidance server and information processing system
HK1186600A1 (en) Data synchronization method, server and distributed system thereof
AP2009005023A0 (en) Method and system for organizing, storing, connecting and displaying medical information
EP2356753A4 (en) Link data transmission method, node and system
EP2346228A4 (en) Method for obtaining link aggregation group information, and node and system thereof
EP2254307A4 (en) Data transmitting method, data processing node and data transmission system
EP2635002A4 (en) Cgn (carrier grade nat) entity based data transmission method, cgn entity, gateway and system
PH12019500791A1 (en) Efficient data structures for bioinformatics information presentation
EP2590394A4 (en) Communication system, communication method, program and information storage medium
EP3396521A4 (en) Data information processing method, and data storage system
EP3065329A3 (en) Aggregated data frame structures
EP2474129A4 (en) Data broker method, apparatus and system
WO2013168117A3 (en) Interventional information brokering medical tracking interface
WO2012033306A3 (en) Method, software, and apparatus for displaying data objects

Legal Events

Date Code Title Description
121 Ep: the epo has been informed by wipo that ep was designated in this application

Ref document number: 11822614

Country of ref document: EP

Kind code of ref document: A2

NENP Non-entry into the national phase

Ref country code: DE

122 Ep: pct application non-entry in european phase

Ref document number: 11822614

Country of ref document: EP

Kind code of ref document: A2