WO2007011571A3 - Digitizing biology - Google Patents

Digitizing biology Download PDF

Info

Publication number
WO2007011571A3
WO2007011571A3 PCT/US2006/026777 US2006026777W WO2007011571A3 WO 2007011571 A3 WO2007011571 A3 WO 2007011571A3 US 2006026777 W US2006026777 W US 2006026777W WO 2007011571 A3 WO2007011571 A3 WO 2007011571A3
Authority
WO
WIPO (PCT)
Prior art keywords
vector space
light
target data
determined
sample
Prior art date
Application number
PCT/US2006/026777
Other languages
French (fr)
Other versions
WO2007011571A2 (en
Inventor
John S Maier
Patrick J Treado
Jeffrey Cohen
Jason Neiss
Original Assignee
Chemimage Corp
John S Maier
Patrick J Treado
Jeffrey Cohen
Jason Neiss
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Priority claimed from US11/000,591 external-priority patent/US7697576B2/en
Application filed by Chemimage Corp, John S Maier, Patrick J Treado, Jeffrey Cohen, Jason Neiss filed Critical Chemimage Corp
Priority to CA002614319A priority Critical patent/CA2614319A1/en
Priority to EP06786809A priority patent/EP1906814A2/en
Publication of WO2007011571A2 publication Critical patent/WO2007011571A2/en
Publication of WO2007011571A3 publication Critical patent/WO2007011571A3/en

Links

Classifications

    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N21/00Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
    • G01N21/62Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light
    • G01N21/63Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light optically excited
    • G01N21/65Raman scattering

Abstract

A method and apparatus for determining the progress of a disease. A pre-determined vector space is determined where the vector space mathematically describes a reference set of wavelength resolved data at a plurality of time intervals. A sample containing at least one cell is irradiated with light. Target data is collected where the target data corresponds to at least one of light emitted from or scattered by the sample and includes a plurality of spatially accurate wavelength resolved measurements of light. The target data is transformed into the pre-determined vector space for each spatially accurate wavelength resolved measurement of light. A distribution of transformed points is analyzed in the plurality of pre-determined vector space. Based on the analysis, a transition of a disease condition of the sample is classified.
PCT/US2006/026777 2004-05-05 2006-07-11 Digitizing biology WO2007011571A2 (en)

Priority Applications (2)

Application Number Priority Date Filing Date Title
CA002614319A CA2614319A1 (en) 2005-07-15 2006-07-11 Digitizing biology
EP06786809A EP1906814A2 (en) 2005-07-15 2006-07-11 Digitizing biology

Applications Claiming Priority (6)

Application Number Priority Date Filing Date Title
US56835704P 2004-05-05 2004-05-05
US11/000,591 US7697576B2 (en) 2004-05-05 2004-11-30 Cytological analysis by raman spectroscopic imaging
US68880105P 2005-06-09 2005-06-09
US69946105P 2005-07-15 2005-07-15
US60/699,461 2005-07-15
US80155906P 2006-05-18 2006-05-18

Publications (2)

Publication Number Publication Date
WO2007011571A2 WO2007011571A2 (en) 2007-01-25
WO2007011571A3 true WO2007011571A3 (en) 2007-06-07

Family

ID=37395076

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/US2006/026777 WO2007011571A2 (en) 2004-05-05 2006-07-11 Digitizing biology

Country Status (1)

Country Link
WO (1) WO2007011571A2 (en)

Families Citing this family (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US7697576B2 (en) 2004-05-05 2010-04-13 Chem Image Corporation Cytological analysis by raman spectroscopic imaging
US9622825B2 (en) * 2011-11-28 2017-04-18 National University Of Singapore Robotic system for flexible endoscopy
DE102014003386B4 (en) * 2014-03-07 2016-06-23 Celltool Gmbh Method and device for quality control of a blood product
US11959858B2 (en) * 2020-06-11 2024-04-16 Virginia Tech Intellectual Properties, Inc. Method and system for high-throughput screening

Citations (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6201989B1 (en) * 1997-03-13 2001-03-13 Biomax Technologies Inc. Methods and apparatus for detecting the rejection of transplanted tissue
US6289236B1 (en) * 1997-10-10 2001-09-11 The General Hospital Corporation Methods and apparatus for distinguishing inflamed and tumorous bladder tissue
US20030018272A1 (en) * 2001-06-28 2003-01-23 Treado Patrick J. Method for Raman chemical imaging and characterization of calcification in tissue
US20040010197A1 (en) * 1998-09-11 2004-01-15 Spectrx, Inc Multi-modal optical tissue diagnostic system
US6826422B1 (en) * 1997-01-13 2004-11-30 Medispectra, Inc. Spectral volume microprobe arrays
US6885965B2 (en) * 2002-05-22 2005-04-26 First Responder Systems Technologies, Llc Processing system for remote chemical identification

Patent Citations (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6826422B1 (en) * 1997-01-13 2004-11-30 Medispectra, Inc. Spectral volume microprobe arrays
US6201989B1 (en) * 1997-03-13 2001-03-13 Biomax Technologies Inc. Methods and apparatus for detecting the rejection of transplanted tissue
US6289236B1 (en) * 1997-10-10 2001-09-11 The General Hospital Corporation Methods and apparatus for distinguishing inflamed and tumorous bladder tissue
US20040010197A1 (en) * 1998-09-11 2004-01-15 Spectrx, Inc Multi-modal optical tissue diagnostic system
US20030018272A1 (en) * 2001-06-28 2003-01-23 Treado Patrick J. Method for Raman chemical imaging and characterization of calcification in tissue
US6885965B2 (en) * 2002-05-22 2005-04-26 First Responder Systems Technologies, Llc Processing system for remote chemical identification

Also Published As

Publication number Publication date
WO2007011571A2 (en) 2007-01-25

Similar Documents

Publication Publication Date Title
Demattê et al. Soil analytical quality control by traditional and spectroscopy techniques: Constructing the future of a hybrid laboratory for low environmental impact
Guerrero et al. Spiking of NIR regional models using samples from target sites: Effect of model size on prediction accuracy
EP3088870B1 (en) Method and device for identifying jewellery and gems
Diago et al. Identification of grapevine varieties using leaf spectroscopy and partial least squares
Wang et al. Estimation of the late postmortem interval using FTIR spectroscopy and chemometrics in human skeletal remains
WO2008100582A3 (en) Spectroscopic system and method for predicting outcome of disease
Aïchi et al. Regional predictions of soil organic carbon content from spectral reflectance measurements
WO2007038754A3 (en) Gene expression profiling for identification monitoring and treatment of rheumatoid arthritis
CA2437681A1 (en) Diagnostic kit with a memory storing test strip calibration codes and related methods
WO2007025044A8 (en) Biomarkers and methods for determining sensitivity to epidermal growth factor receptor modulators
CN106680238B (en) Method based on infrared spectrum analysis material component content
Bricklemyer et al. Intact soil core total, inorganic, and organic carbon measurement using laser‐induced breakdown spectroscopy
EP1890142A3 (en) Blood coagulation analyzer and blood coagulation analyzing method
WO2012125807A3 (en) Systems and compositions for diagnosing barrett's esophagus and methods of using the same
WO2005094332A3 (en) Biomarkers and methods for determining sensitivity to epidermal growth factor receptor modulators in non-small cell lung cancer
AU2003298412A1 (en) Analytical platform and identification method
NZ599772A (en) Method for determining polycyclic aromatic hydrocarbon contaminant concentration
Håkanson et al. Coefficients of variation for chlorophyll, green algae, diatoms, cryptophytes and blue-greens in rivers as a basis for predictive modelling and aquatic management
JP2022172139A (en) Cross-validation based calibration of spectrum model
Mäkipää et al. The costs of monitoring changes in forest soil carbon stocks
Schulmerich et al. Protein and oil composition predictions of single soybeans by transmission Raman spectroscopy
Potyrailo et al. Development of combinatorial chemistry methods for coatings: High-throughput screening of abrasion resistance of coatings libraries
WO2007011571A3 (en) Digitizing biology
Cezar et al. Organic matter and sand estimates by spectroradiometry: Strategies for the development of models with applicability at a local scale
EP2422182B1 (en) Method and apparatus for multi-parameter data analysis

Legal Events

Date Code Title Description
121 Ep: the epo has been informed by wipo that ep was designated in this application
DPE2 Request for preliminary examination filed before expiration of 19th month from priority date (pct application filed from 20040101)
WWE Wipo information: entry into national phase

Ref document number: 2006786809

Country of ref document: EP

ENP Entry into the national phase

Ref document number: 2614319

Country of ref document: CA

NENP Non-entry into the national phase

Ref country code: DE